Hongkai’s Research Group |
People |
HONGKAI JI, Ph.D. [CV] Professor, Department of Biostatistics Johns Hopkins Bloomberg School of Public Health 615 North Wolfe Street, Room E3638, Baltimore, MD 21205, USA Phone: (410) 955-3517 Fax: (410) 955-0958 Email: hji@jhu.edu |
Current GROUP members |
FORMER GROUP MEMBERS & VISITING SCHOLARS |
Ruzhang Zhao, PhD Candidate (Biostatistics, co-advisor: Nilanjan Chatterjee) |
Weixiang Fang, PhD Candidate (Biostatistics) |
Boyang Zhang, PhD Candidate (Biostatistics) |
Wanlu Chen, ScM Candidate (Biostatistics) |
Yi Wang, PhD Candidate (Biostatistics, co-advisor: Kasper Hansen) |
Chaoran Chen, MSE Candidate (Biomedical Engineering) |
Jordan Wilson, PhD Candidate (XDBio, co-advisor: Jennifer Elisseeff) |
Richard Xu, BS Candidate (Molecular & Cellular Biology, Computer Science) |
Name |
Position |
Year |
Other Advisors |
Projects Involved |
Current Position |
Postdoc |
2013 |
|
Time course ChIP-seq |
Assistant Professor, University of Victoria |
|
Fang Du |
Postdoc |
2014 |
|
BDVD, BigClust |
Data Scientist, Covance |
Postdoc |
2015 |
|
Big data prediction |
Assistant Professor, University of Kansas |
|
Postdoc |
2018 |
|
BIRD, SCRAT, SCATE |
Assistant Scientist, Johns Hopkins University |
|
PhD |
2010 |
Rafael Irizarry |
JAMIE, PolyaPeak |
Associate Professor, Emory University |
|
Yang Ning |
PhD |
2012 |
Kung-Yee Liang |
dPCA |
Assistant Professor, Cornell University |
PhD |
2013 |
|
ChIP-PED, ChIPXpress |
Crescendo Bioscience |
|
PhD |
2014 |
|
iASeq, CorMotif |
Associate Professor, Chinese University of Hong Kong |
|
PhD |
2017 |
|
FCAT |
Data Scientist, Vatic Labs |
|
PhD |
2017 |
|
Permutation adjustment |
Data Scientist, Drawbridge |
|
PhD |
2020 |
|
TSCAN, SCATE, SCRAT,GSCA,RAISIN |
Assistant Professor, Duke University |
|
MHS |
2011 |
|
hmChIP |
Assistant Professor, Auburn University |
|
ScM |
2012 |
|
GEO annotation |
PhD student, Yale University |
|
MHS |
2012 |
PhD in Mol. Biol. & Genetics with Jef Boeke |
LisaMap |
L.E.K. Consulting |
|
MHS |
2014 |
PhD in Mol. Biol. & Genetics with Jef Boeke |
Time course ChIP-seq |
Assistant Professor, Carnegie Mellon University |
|
ScM |
2014 |
|
Motif, CpG Island |
PhD student, Univ. of Wisconsin, Madison |
|
MHS |
2015 |
PhD in Mol. Biol. & Genetics with Duojia Pan |
ChIP-seq |
MD Anderson Cancer Center |
|
Ding Ding |
ScM |
2017 |
|
Spanning trees |
Research fellow, Johns Hopkins School of Medicine |
Yifan Zhou |
ScM |
2017 |
|
HiC |
PhD student, George Washington University |
Gege Gui |
ScM |
2018 |
|
ALS, ChIRP |
Research associate, NIH/NHLBI |
Chang (April) Shu |
MHS |
2018 |
PhD in Mental Health |
EWAS |
Postdoc, Yale University |
Luqin Gan |
ScM |
2019 |
|
Semi-supervised learning |
PhD student, Rice University |
Yueyi (Kate) Li |
ScM |
2020 |
|
scBIRD |
Foundation Medicine |
Jennifer Toolan Judy |
Worked on Project |
2009 |
|
|
PhD, Johns Hopkins University |
Worked on Project |
2011 |
|
|
Assistant Professor, University of Washington |
|
Luolan Li |
Visiting Student |
2012 |
|
|
PhD student, University of British Columbia |
Ashwini Patil |
Worked on Project |
2013 |
|
|
MS student, Johns Hopkins University |
Worked on Project |
2014 |
|
|
Assistant Scientist, Johns Hopkins University |
|
Hongqiang Lyu |
Visiting Scholar |
2018 |
|
HiC |
Xi’an Jiaotong University |
Weiqing Huang |
Visiting Student |
2019 |
|
Prediction & functional interpretation of genetic variants |
Tsinghua University |